piwik-script

Deutsch Intern
    Chair of Computer Science VI - Artificial Intelligence and Applied Computer Science

    Jonatha Krebs, M.Sc.

    University of Würzburg
    Chair of Artificial Intelligence
    and Knowledge Systems
    Am Hubland
    D-97074 Würzburg

    Room: B007
    Phone: +49 931 / 31 - 89648
    Fax: +49 931 / 31 - 86732

    jonathan.krebs@uni-wuerzburg.de

     

     

    About Me

    I am working at the Department for Artificial Intelligence and Applied Computer Science since the beginning of 2015. While working at the PaDaWaN/misbased project, I finished my master's degree in computer science in autumn 2016.

    Research Interests

    My research interests include:

    • machine learning
    • textmining
    • natural language processing
    • ontology learning
    • knowledge-based systems
    • software development

    ... especially in the domain of medical text documents, but also in every other possible domain.

     

    Private Interests

    In my spare time I am playing keyboards and drums in several bands and orchestras and I am very interested in music from all epochs and styles in general. Further interests include books, films and tv shows, fotography, dancing, pc and board games, ...

     

    Teaching

    WS 18/19 Natural Language Processing and Textmining (Coordinator for exercises)
    SS 18 Medical Informatics(Coordinator for exercises)
    WS 17/18 Natural Language Processing and Textmining (Coordinator for exercises)
    SS 17 Software engineering (Coordinator for exercises)
    regularly Supervision of seminar papers, groups in the software practical course and final theses.

    Publications

    2019[ to top ]
    • Exploration of Artificial Intelligence Use with ARIES in Multiple Myeloma Research. Loda; Krebs; Danhof; Schreder; Solimando; Strifler; Rasche; Kortüm; Kerscher; Knop; et al. in Journal of Clinical Medicine (2019). 8(7) 999.
    • Identifying Heart Failure Patients by Medical Text Classification. Krebs, Jonathan; Krug, Markus; Fette, Georg; Dietrich, Georg; Ertl, Maximilian; Güder, Gülmisal; Puppe, Frank; Kaspar, Mathias in EFMI-STC, Studies in Health Technology and Informatics, A. S. Shvo, I. Madsen, H.-U. Prokosch, K. Häyrinen, K.-H. Wolf, F. Martín-Sánchez, M. Löbe, T. M. Deserno (Hrsg.) (2019). (Bd. 258) 251–252.
    • Detection of Scenes in Fiction. Gius, Evelyn; Jannidis, Fotis; Krug, Markus; Zehe, Albin; Hotho, Andreas; Puppe, Frank; Krebs, Jonathan; Reiter, Nils; Wiedmer, Nathalie; Konle, Leonard in Proceedings of Digital Humanities 2019 (2019).
    • Implementation of a HL7 CQL engine using the graph database Neo4J. Fette, Georg; Kaspar, Mathias; Liman, Leon; Eertl, Maximilian; Krebs, Jonathan; Störk, Stefan; Puppe, Frank (2019).
    • Query Translation between AQL and CQL. Fette, Georg; Kaspar, Mathias; Leon, Liman; Ertl, Maximilian; Krebs, Jonathan; Dietrich, Georg; Störk, Stefan; Puppe, Frank (2019).
    • Replicating medication trend studies using ad hoc information extraction in a clinical data warehouse. Dietrich, Georg; Krebs, Jonathan; Liman, Leon; Fette, Georg; Ertl, Maximilian; Kaspar, Mathias; Störk, Stefan; Puppe, Frank in BMC Med. Inf. & Decision Making (2019). 19(1) 15:1–15:21.
    2018[ to top ]
    • Finding Needles in the Haystack: Identifying Patients with Rare Subtype of Multiple Myeloma Supported by a Data Warehouse and Information Extraction. Krebs, Jonathan; Bittrich, Max; Dietrich, Georg; Ertl, Maximilian; Fette, Georg; Kaspar, Mathias; Liman, Leon; Einsele, Hermann; Puppe, Frank; Knop, Stefan in GMDS, Studies in Health Technology and Informatics, U. Hübner, U. Sax, H.-U. Prokosch, B. Breil, H. Binder, A. Zapf, B. Strahwald, T. Beißbarth, N. Grabe, A. Schöler (Hrsg.) (2018). (Bd. 253) 160–164.
    • Estimating a Bias in ICD Encodings for Billing Purposes. Fette, Georg; Krug, Markus; Kaspar, Mathias; Liman, Leon; Dietrich, Georg; Ertl, Maximilian; Krebs, Jonathan; Störk, Stefan; Puppe, Frank in MIE, Studies in Health Technology and Informatics, A. Ugon, D. Karlsson, G. O. Klein, A. Moen (Hrsg.) (2018). (Bd. 247) 141–145.
    • Exporting Data from a Clinical Data Warehouse. Fette, Georg; Kaspar, Mathias; Liman, Leon; Dietrich, Georg; Ertl, Maximilian; Krebs, Jonathan; Störk, Stefan; Puppe, Frank in eHealth, Studies in Health Technology and Informatics, G. Schreier, D. Hayn (Hrsg.) (2018). (Bd. 248) 88–93.
    • Ad Hoc Information Extraction for Clinical Data Warehouses. Dietrich, Georg; Krebs, Jonathan; Fette, Georg; Ertl, Maximilian; Kaspar, Mathias; Störk, Stefan; Puppe, Frank in Methods of Information in Medicine (2018).
    2017[ to top ]
    • Semi-Automatic Terminology Generation for Information Extraction from German Chest X-Ray Reports. Krebs, Jonathan; Corovic, Hamo; Dietrich, Georg; Ertl, Max; Fette, Georg; Kaspar, Mathias; Krug, Markus; Störk, Stefan; Puppe, Frank in GMDS, Studies in Health Technology and Informatics, R. Röhrig, A. Timmer, H. Binder, U. Sax (Hrsg.) (2017). (Bd. 243) 80–84.
    • A Customizable Importer for the Clinical Data Warehouses PaDaWaN and I2B2. Fette, Georg; Kaspar, Mathias; Dietrich, Georg; Ertl, Maximilian; Krebs, Jonathan; Störk, Stefan; Puppe, Frank in GMDS, Studies in Health Technology and Informatics, R. Röhrig, A. Timmer, H. Binder, U. Sax (Hrsg.) (2017). (Bd. 243) 90–94.
    • Extending the Query Language of a Data Warehouse for Patient Recruitment. Dietrich, Georg; Ertl, Maximilian; Fette, Georg; Kaspar, Mathias; Krebs, Jonathan; Mackenrodt, Daniel; Störk, Stefan; Puppe, Frank in GMDS, Studies in Health Technology and Informatics, R. Röhrig, A. Timmer, H. Binder, U. Sax (Hrsg.) (2017). (Bd. 243) 152–156.
    2016[ to top ]
    • Anonymisierung, Segmentierung und Terminologie-Entwicklung zur Informationsextraktion aus unstrukturierten, telegrammartigen, medizinischen Dokumenten Krebs, Jonathan (2016).
    • An improved data workflow for a medical data warehouse. Fette, Georg; Ertl, Maximilian; Dietrich, Georg; Krebs, Jonathan; Toepfer, Martin; Störk, Stefan; Kaspar, Mathias; Puppe, Frank in European Journal of Epidemiology; Health—exploring complexity: an interdisciplinary systems approach HEC2016 (2016). 31, Supplement 1 54.
    • Web-PaDaWaN: Eine Web-basierte Benutzeroberfläche für ein klinisches Data Warehouse. Dietrich, Georg; Fell, Friedreich; Fette, Georg; Krebs, Jonathan; Ertl, Maximilian; Kaspar, Mathias; Störk, Stefan (2016).
    2013[ to top ]
    • Implementierung einer HTML5-Applikation mit Offline-Fähigkeit zur Erstellung von Graphen für den Einsatz im CaseTrain-Projekt Krebs, Jonathan (2013).